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General stock information
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Common name
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Rainbow trout
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Scientific name
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Oncorhynchus mykiss (Walbaum, 1792)
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Strain code
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TH 7 C
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Recording year
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2018
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Federal state
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Thüringen
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Reference
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Statusanalyse der genetischen Vielfalt von Zuchtsalmoniden in Deutschland
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Aquaculture system
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raceway
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Indoor aquaculture
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No
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Re-circulation of water
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no
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Feeding basis
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complete feeding
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Used molecular genetic methods
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mtDNA Analyse / Mikrosatellitenanalyse
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Number of individuals analyzed for mitochondrial DNA
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10
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Tissue sample accession number
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TH 7 C_1-25
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NCBI sequence data accession numbers
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HM229303;HM229299;HM229305
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Haplotype diversity
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0.511
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Nucleotide diversity
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0.0017
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Number of individuals analyzed by microsatellites
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25
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Maximum number alleles per Microsatellite
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10
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Mean number of alleles
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5.273
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Allelic richness
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3.409
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Expected degree of heterozygosity according to HWG (HE)
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0.617
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Observed heterozygosity (HO)
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0.62
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Inbreeding coefficient (FIS)
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-0.009
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Minimal genetic divergence (FST min)
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0.034
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Maximum genetic divergence (FST) to other populations of the same species
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0.171
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Mean genetic divergence (FST) to other populations of the same species
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0.066
